Research papers by PDC staff
Here is a list of recently published research papers by PDC staff members. For a full list of publications by PDC staff, use the link at the end of the page.
Note that for some of the papers you might need to click on "Show others and affiliations" to see the authors from PDC.
B. Sadhukhan et al., "Spin-lattice couplings in two-dimensional CrI3 from first-principles computations," Physical Review B, vol. 105, no. 10, 2022.
J. Vincent et al., "Strong Scaling of OpenACC enabled Nek5000 on several GPU based HPC systems," in HPCAsia2022 : International Conference on High Performance Computing in Asia-Pacific Region, 2022, pp. 94-102.
M. Karp et al., "A High-Fidelity Flow Solver for Unstructured Meshes on Field-Programmable Gate Arrays: Design, Evaluation, and Future Challenges," in HPCAsia2022: International Conference on High Performance Computing in Asia-Pacific Region, 2022, pp. 125-136.
E. Kliuchnikov et al., "Microtubule assembly and disassembly dynamics model : Exploring dynamic instability and identifying features of Microtubules' Growth, Catastrophe, Shortening, and Rescue," Computational and Structural Biotechnology Journal, vol. 20, pp. 953-974, 2022.
M. Atzori et al., "In situ visualization of large-scale turbulence simulations in Nek5000 with ParaView Catalyst," Journal of Supercomputing, vol. 78, no. 3, pp. 3605-3620, 2022.
S. R. Alam et al., "Fenix : A Pan-European Federation of Supercomputing and Cloud e-Infrastructure Services," Communications of the ACM, vol. 65, no. 4, pp. 46-47, 2022.
N. L. Asquith et al., "Fibrin protofibril packing and clot stability are enhanced by extended knob-hole interactions and catch-slip bonds," Blood Advances, vol. 6, no. 13, pp. 4015-4027, 2022.
E. Kliuchnikov et al., "CellDynaMo-stochastic reaction-diffusion-dynamics model : Application to search-and-capture process of mitotic spindle assembly," PloS Computational Biology, vol. 18, no. 6, 2022.
M. Karp et al., "Reducing Communication in the Conjugate Gradient Method : A Case Study on High-Order Finite Elements," in Proceedings of the Platform for Advanced Scientific Computing Conference, PASC 2022, 2022.
R. E. Smail et al., "Tensor Charges and their Impact on Physics Beyond the Standard Model," in Proceedings of Science, 2022.
B. Brank and D. Pleiter, "Assessing the State of Autovectorization Support based on SVE," in 2022 IEEE INTERNATIONAL CONFERENCE ON CLUSTER COMPUTING (CLUSTER 2022), 2022, pp. 556-562.
J. Senk et al., "Connectivity concepts in neuronal network modeling," PloS Computational Biology, vol. 18, no. 9, pp. e1010086, 2022.
M. Batelaan et al., "Nucleon Form Factors from the Feynman-Hellmann Method in Lattice QCD," in Proceedings of Science, 2022.
S. A. De La Motte et al., "Measurements of SU(3) f symmetry breaking in B meson decay constants," in Proceedings of Science, 2022.
J. M. Bickerton et al., "Patterns of flavour symmetry breaking in hadron matrix elements involving u, d and s quarks," in Proceedings of Science, 2022.
A. Qasem et al., "Lightning Talks of EduHPC 2022," in 2022 IEEE/ACM INTERNATIONAL WORKSHOP ON EDUCATION FOR HIGH PERFORMANCE COMPUTING (EDUHPC), 2022, pp. 42-49.
V. Borisov et al., "Tuning skyrmions in B20 compounds by 4d and 5d doping," Physical Review Materials, vol. 6, no. 8, 2022.
A. Alekseenko, S. Pall and E. Lindahl, "Experiences with Adding SYCL Support to GROMACS," in IWOCL'21 : Proceedings International Workshop on OpenCL IWOCL 2021, 2021.
M. Saeedimasine et al., "Elucidating axonal injuries through molecular modelling of myelin sheaths and nodes of Ranvier," Frontiers in Molecular Biosciences, vol. 8, 2021.
M. D’Orto et al., "Comparing Different Approaches for Solving Large Scale Power-flow Problems with the Newton-Raphson Method," IEEE Access, vol. 9, pp. 56604-56615, 2021.
T. Kjellsson Lindblom and S. Selsto, "Relativistic photoionization with elliptically polarized laser fields in the ultraviolet region," Physical Review A: covering atomic, molecular, and optical physics and quantum information, vol. 104, no. 4, 2021.
C. Haine et al., "A Middleware Supporting Data Movement in Complex and Software-Defined Storage and Memory Architectures," in High Performance Computing - ISC High Performance Digital 2021 International Workshops, 2021, pp. 346-357.
M. Brand et al., "Size-dependent polarizabilities and van der Waals dispersion coefficients of fullerenes from large-scale complex polarization propagator calculations," Journal of Chemical Physics, vol. 154, no. 7, 2021.
F. Liu et al., "Accelerating Radiation Therapy Dose Calculation with Nvidia GPUs," in IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum (IPDPSW), 2021.
T. Dykes et al., "Mamba: Portable Array-based Abstractions for Heterogeneous High-Performance Systems," in 2021 International Workshop on Performance, Portability and Productivity in HPC (P3HPC), 2021.