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Research papers by PDC staff

Here is a list of recently published research papers by PDC staff members. For a full list of publications by PDC staff, use the link at the end of the page.

Note that for some of the papers you might need to click on "Show others and affiliations" to see the authors from PDC. 

[1]
B. Sadhukhan et al., "Spin-lattice couplings in two-dimensional CrI3 from first-principles computations," Physical Review B, vol. 105, no. 10, 2022.
[2]
J. Vincent et al., "Strong Scaling of OpenACC enabled Nek5000 on several GPU based HPC systems," in HPCAsia2022 : International Conference on High Performance Computing in Asia-Pacific Region, 2022, pp. 94-102.
[3]
M. Karp et al., "A High-Fidelity Flow Solver for Unstructured Meshes on Field-Programmable Gate Arrays: Design, Evaluation, and Future Challenges," in HPCAsia2022: International Conference on High Performance Computing in Asia-Pacific Region, 2022, pp. 125-136.
[5]
M. Atzori et al., "In situ visualization of large-scale turbulence simulations in Nek5000 with ParaView Catalyst," Journal of Supercomputing, vol. 78, no. 3, pp. 3605-3620, 2022.
[6]
S. R. Alam et al., "Fenix : A Pan-European Federation of Supercomputing and Cloud e-Infrastructure Services," Communications of the ACM, vol. 65, no. 4, pp. 46-47, 2022.
[7]
[8]
V. Borisov et al., "Tuning skyrmions in B20 compounds by 4d and 5d doping," Physical Review Materials, vol. 6, no. 8, 2022.
[10]
M. Karp et al., "Reducing Communication in the Conjugate Gradient Method : A Case Study on High-Order Finite Elements," in Proceedings of the Platform for Advanced Scientific Computing Conference, PASC 2022, 2022.
[11]
R. E. Smail et al., "Tensor Charges and their Impact on Physics Beyond the Standard Model," in Proceedings of Science, 2022.
[12]
A. Alekseenko, S. Pall and E. Lindahl, "Experiences with Adding SYCL Support to GROMACS," in IWOCL'21 : Proceedings International Workshop on OpenCL IWOCL 2021, 2021.
[13]
X. Aguilar and S. Markidis, "A Deep Learning-Based Particle-in-Cell Method for Plasma Simulations," in 2021 IEEE International Conference On Cluster Computing (CLUSTER 2021), 2021, pp. 692-697.
[14]
F. Liu et al., "Accelerating Radiation Therapy Dose Calculation with Nvidia GPUs," in IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum (IPDPSW), 2021.
[15]
M. Saeedimasine et al., "Elucidating axonal injuries through molecular modelling of myelin sheaths and nodes of Ranvier," Frontiers in Molecular Biosciences, vol. 8, 2021.
[17]
N. Jansson, "Spectral Element Simulations on the NEC SX-Aurora TSUBASA," in HPC Asia 2021: The International Conference on High Performance Computing in Asia-Pacific Region, 2021.
[18]
T. Kjellsson Lindblom and S. Selsto, "Relativistic photoionization with elliptically polarized laser fields in the ultraviolet region," Physical Review A: covering atomic, molecular, and optical physics and quantum information, vol. 104, no. 4, 2021.
[19]
T. Dykes et al., "Mamba: Portable Array-based Abstractions for Heterogeneous High-Performance Systems," in 2021 International Workshop on Performance, Portability and Productivity in HPC (P3HPC), 2021.
[20]
C. Haine et al., "A Middleware Supporting Data Movement in Complex and Software-Defined Storage and Memory Architectures," in High Performance Computing - ISC High Performance Digital 2021 International Workshops, 2021, pp. 346-357.
[22]
M. Karp et al., "Optimization of Tensor-product Operations in Nekbone on GPUs," in The International Conference for High Performance Computing, Networking, Storage, and Analysis, 2020, 2020.
[23]
T. Kjellsson Lindblom et al., "Relativistic effects in photoionizing a circular Rydberg state in the optical regime," Physical Review A: covering atomic, molecular, and optical physics and quantum information, vol. 102, no. 6, 2020.
[24]
V. A. Fedorov et al., "Update on Performance Analysis of Different Computational Architectures : Molecular Dynamics in Application to Protein-Protein Interactions," Supercomputing Frontiers and Innovations, vol. 7, no. 4, pp. 62-67, 2020.
[25]
S. Pall et al., "Heterogeneous parallelization and acceleration of molecular dynamics simulations in GROMACS," Journal of Chemical Physics, vol. 153, no. 13, 2020.
Full list in the KTH publications portal