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Hardware

Lucidor's hardware.
Lucidor

Lucidor is a distributed memory computer (a cluster) from HP. It consists of 74 HP rx2600 servers and 16 HP zx6000 workstations, each with two 900 MHz Itanium 2 "McKinley" processors and 6 GB of main memory. The rx2600 and zx6000 nodes differ only in the configuration of the memory banks (although they both have the same total amount of main memory) and in that the zx6000 has a PCI-X slot replaced with an AGP slot with a graphics card.

The interconnect is myrinet. All nodes have a Myricom M3F-PCIXD-2 card (64-bit wide 133 MHz PCI-X.) All cards are connected to a Myrinet-2000 M3-E128 switch populated with 96 ports. Each card/port has a data rate of 2+2 Gbit/s, all through 50/125 multi-mode fiber.

Machine configuration

As of February 2006, all nodes are nicknamed B in the queing system. Previously, the 16 zx6000 workstations were nicknamed A. Values of memory and disk space available on individual node types above are guaranteed space. Some nodes may provide additional memory and/or disk.
Number
of nodes
 MHz  CPU
type
Peak
GFlop/s
RAM
(GB)
Disk
(GB)
Scratch
(GB)
Nick-
name
90 900.0 McKinley 7.2 6 30 21 B
Total
 90      648  540   1890  

In addition to local disk there is plenty of space in the distributed file systems for user home catalogues, source codes, application codes et cetera, as well as a mass storage system for long-term storage of large data sets.

Some performance and cache size numbers

Node type (nickname) B unit
Processor McKinley  
Processors per node 2  
Memory Bandwidth 6.4 GByte/sec
Local Disk I/O Bandwidth 58 MByte/sec (measured writes)
Network Adapter Peak Bandwidth (unidirectional) 248 MByte/sec
Network Adapter Peak Bandwidth (bidirectional) 489 MByte/sec
Network Latency 6.3 microseconds (measured)
L1 Inst Cache 16 Kilobytes
L1 Data Cache 16 Kilobytes (bypassed for floating point)
L1 Data Cache Line 64 Bytes
L1 Data Cache Associativity 4 Ways
L2 Cache 256 Kilobytes
L2 Cache Line 128 Bytes
L2 Cache Associativity 8 Ways
L3 Cache 1.5 Megabytes
L3 Cache Line 128 Bytes
L3 Cache Associativity 6 Ways

Software

The operating system for these nodes is Debian Linux and FAI (Fully Automatic Installation) was used when installing the nodes. Programming languages supported are C, C++, FORTRAN77 and Fortran90. For more information about available software see the software section.

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